PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_03956.1_g00007.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 292aa    MW: 31750.3 Da    PI: 10.0298
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_03956.1_g00007.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.51.9e-15131182455
                              XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                              +kr +r+ +NRe+ArrsR+RK+a + eLe+ v +L  eN+ L k l   +++
  Rsa1.0_03956.1_g00007.1 131 VKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSNLMKGLTDVTQT 182
                              79****************************************9988777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.6E-17128192IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841130193IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-11130182No hitNo description
PfamPF001701.9E-13131178IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.8E-12132181No hitNo description
PROSITE patternPS000360135150IPR004827Basic-leucine zipper domain
PfamPF124982.2E-13199243IPR020983Basic leucine-zipper, C-terminal
PfamPF124981.7E-6238287IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
SSGTNRSESE WAFHRFLQES SDASAGVAAT ASVSGPSSPV DSHEYREILK SKLNLAYAAV  60
VAMKRGGFIK PQDTSGRSEN GGGAYTSDQG SLASPKATPV MSSTITSGSE LSGDEEEEEA  120
DGETNMNPTN VKRVKRMLSN RESARRSRRR KQAHLSELET QVSQLRVENS NLMKGLTDVT  180
QTFNDASVEN RVLKANLETL RAKVKMAEET VKRITGFNPM FHTMPQVSSV SNLSETSNSL  240
GTSSQVTTPE TPSSSNNKSK ALIGCKMNRT ESMRRVASLE HLQKRIRSVG DK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144151RRSRRRKQ
2146151SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013644045.11e-169PREDICTED: basic leucine zipper 63-like
SwissprotB9DGI81e-146BZP63_ARATH; Basic leucine zipper 63
TrEMBLA0A078DAE21e-169A0A078DAE2_BRANA; BnaA06g29270D protein
STRINGBra010010.1-P1e-168(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM68462743
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.21e-121bZIP family protein